Overdue Tax invoice and Overdue commission invoices

There are overdue Tax invoice (withholding tax) for past 5-6 months of which I have done the payment today but the same has not been updated in the invoice section of app. Also how do I pay commission invoices from UPI and what details to include in that. And I also have some overdue commission payments is there any additional charges to be paid for that or just the outstanding commission only ?