Same Agoda issues.
Booking.com and Agoda are affiliates, both owned by the Priceline company. The Booking.com support team doesn't like the Agoda connection neither but it's beyond their control.
Even if you close inventory on Agoda it will pull inventory from Booking.com and your property remains bookable on Agoda as well.
What we did is actually delete essential images on Agoda. You can't delete the main image nor any of your room types but you can delete all other hotel and room images so that due to a lack of room image, Agoda can only show the main hotel image for each room type. Since Agoda visitors can't see an image of our room types, we did not receive a booking on Agoda since hence gone the issues with wrong mapping, incomplete info and the poorest of all customer services.
We've also terminated the contract and informed both Agoda and Booking.com that we will not honour any Agoda bookings anymore. Requests to remove us from the Agoda website have been left unanswered, of course.
Same as requests for cancelling Tripadvisor business listing, another company with epic customer service ...
Hope this helps.